: photosynthesis

: NADPH to cytochrome c oxidase via plastocyanin,
succinate to cytochrome c oxidase via plastocyanin,
cyclic electron flow,
photosynthesis light reactions

: BR37057, BS453796

: R03817, R08409

: PLASTOQUINOL--PLASTOCYANIN-REDUCTASE-RXN

: The reaction catalyzed by EC-7.1.1.6 is achieved by the Q-cycle. The Q-cycle can be divided into two halves. In the first half, a molecule of Plastoquinols plastoquinol transfers its electrons via bifurcation to two acceptors: the first electron is transferred to Plastocyanin-Reduced, releasing a proton to the thylakoid lumen and forming a radical Semiplastoquinones semiplastoquinone. The semiquinone radical donates the second electron to cytochrome b6, where it is transferred to a different PLASTOQUINONE plastoquinone molecule, forming another semiplastoquinone radical. This sequence of events can be summarized by the following reaction: RXN-22952 In the second half of the cycle, another Plastoquinols plastoquinol is processed in a similar manner. It too transfers its electrons via bifurcation to Plastocyanin-Reduced, releasing a second proton to the thylakoid lumen and forming a radical Semiplastoquinones semiplastoquinone. This radical transfers the second electron to cytochrome b6. However, at this point the second cycle differs from the first one, since the second electron reaches the semiquinone that formed during the first half cycle, resulting in its reduction to Plastoquinols plastoquinolin a reaction that extracts two protons from the cytoplasmic side of the thylakoid membrane. This half cycle could be summarized as follows: TRANS-RXN-509

: photosynthesis

: Glycolysis / Gluconeogenesis,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Biosynthesis of secondary metabolites,
Microbial metabolism in diverse environments,
Carbon metabolism,
Biosynthesis of amino acids

: Calvin-Benson-Bassham cycle

: BR1125, BS424566

: R01063

: 1.2.1.13-RXN, GAPDHSYNEC-RXN

: 1335, 7845

: NAD+ (ec 1.2.1.59, see R01061)

: photosynthesis

: Glycolysis / Gluconeogenesis,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Biosynthesis of secondary metabolites,
Microbial metabolism in diverse environments,
Carbon metabolism,
Biosynthesis of amino acids

: Calvin-Benson-Bassham cycle

: BR1125, BS424566

: R01063

: 1.2.1.13-RXN, GAPDHSYNEC-RXN

: 1335, 7845

: NAD+ (ec 1.2.1.59, see R01061)

: photosynthesis,
C4 and CAM-carbon fixation

: Glycolysis / Gluconeogenesis,
Pyruvate metabolism,
Carbon fixation in photosynthetic organisms,
Carbon fixation pathways in prokaryotes,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism

: nitrogen remobilization from senescing leaves,
C4 photosynthetic carbon assimilation cycle, PEPCK type,
C4 photosynthetic carbon assimilation cycle, NAD-ME type,
C4 photosynthetic carbon assimilation cycle, NADP-ME type

: BR48096

: R00206

: PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN

: 147

: multi-step reaction

: gluconeogenesis,
photosynthesis,
C4 and CAM-carbon fixation

: Pyruvate metabolism,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism

: C4 photosynthetic carbon assimilation cycle, PEPCK type,
C4 photosynthetic carbon assimilation cycle, NADP-ME type,
gluconeogenesis I

: BR29303, BS355850

: R00216

: MALIC-NADP-RXN

: 142

: gluconeogenesis,
photosynthesis,
C4 and CAM-carbon fixation

: Pyruvate metabolism,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism

: C4 photosynthetic carbon assimilation cycle, PEPCK type,
C4 photosynthetic carbon assimilation cycle, NADP-ME type,
gluconeogenesis I

: BR29303, BS355850

: R00216

: MALIC-NADP-RXN

: 142

: citric acid cycle,
photosynthesis,
C4 and CAM-carbon fixation

: Pyruvate metabolism,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism

: C4 photosynthetic carbon assimilation cycle, PEPCK type,
C4 photosynthetic carbon assimilation cycle, NADP-ME type

: BR29342, BS188648

: R00343

: MALATE-DEHYDROGENASE-NADP+-RXN, RXN-10813

: 143

: citric acid cycle,
photosynthesis,
C4 and CAM-carbon fixation

: Pyruvate metabolism,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism

: C4 photosynthetic carbon assimilation cycle, PEPCK type,
C4 photosynthetic carbon assimilation cycle, NADP-ME type

: BR29342, BS188648

: R00343

: MALATE-DEHYDROGENASE-NADP+-RXN, RXN-10813

: 143

: citric acid cycle,
photosynthesis,
C4 and CAM-carbon fixation

: Pyruvate metabolism,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism

: C4 photosynthetic carbon assimilation cycle, PEPCK type,
C4 photosynthetic carbon assimilation cycle, NADP-ME type

: BR29342, BS188648

: R00343

: MALATE-DEHYDROGENASE-NADP+-RXN, RXN-10813

: 143

: gluconeogenesis,
photosynthesis,
C4 and CAM-carbon fixation

: Pyruvate metabolism,
Methane metabolism,
Carbon fixation in photosynthetic organisms,
Carbon fixation pathways in prokaryotes,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism

: BS1399

: R00345

: 150

: glycolysis,
photosynthesis

: Methane metabolism,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism,
Glycolysis / Gluconeogenesis,
Pentose phosphate pathway,
Fructose and mannose metabolism,
Biosynthesis of secondary metabolites,
Biosynthesis of amino acids

: gluconeogenesis II (Methanobacterium thermoautotrophicum),
glycolysis I (from glucose 6-phosphate),
sucrose biosynthesis I (from photosynthesis),
glycolysis III (from glucose),
glycolysis II (from fructose 6-phosphate),
1,3-propanediol biosynthesis (engineered),
glycolysis V (Pyrococcus),
gluconeogenesis I,
gluconeogenesis III,
Calvin-Benson-Bassham cycle,
formaldehyde assimilation III (dihydroxyacetone cycle),
formaldehyde assimilation II (assimilatory RuMP Cycle),
glycolysis IV

: BR344, BS398846

: R01068, R01070

: F16ALDOLASE-RXN

: 1338, 3

: glycolysis,
photosynthesis

: Methane metabolism,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism,
Glycolysis / Gluconeogenesis,
Pentose phosphate pathway,
Fructose and mannose metabolism,
Biosynthesis of secondary metabolites

: glycolysis I (from glucose 6-phosphate),
sucrose biosynthesis I (from photosynthesis),
glycolysis II (from fructose 6-phosphate),
gluconeogenesis I,
gluconeogenesis III,
Calvin-Benson-Bassham cycle,
formaldehyde assimilation III (dihydroxyacetone cycle)

: BR19198

: R00762, R04780

: F16BDEPHOS-RXN

: 10378, 1117

: glycolysis,
photosynthesis

: Methane metabolism,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism,
Glycolysis / Gluconeogenesis,
Pentose phosphate pathway,
Fructose and mannose metabolism,
Biosynthesis of secondary metabolites

: glycolysis I (from glucose 6-phosphate),
sucrose biosynthesis I (from photosynthesis),
glycolysis II (from fructose 6-phosphate),
gluconeogenesis I,
gluconeogenesis III,
Calvin-Benson-Bassham cycle,
formaldehyde assimilation III (dihydroxyacetone cycle)

: BR19198

: R00762, R04780

: F16BDEPHOS-RXN

: 10378, 1117

: pentose phosphate pathway,
photosynthesis

: Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism,
Pentose phosphate pathway,
Biosynthesis of secondary metabolites,
Biosynthesis of amino acids

: pentose phosphate pathway (non-oxidative branch) II,
superpathway of glucose and xylose degradation,
Calvin-Benson-Bassham cycle,
Rubisco shunt,
pentose phosphate pathway (non-oxidative branch) I,
formaldehyde assimilation III (dihydroxyacetone cycle),
formaldehyde assimilation II (assimilatory RuMP Cycle),
pentose phosphate pathway (partial)

: BS320170, BS320221, BS434641

: R01067, R01830

: 2TRANSKETO-RXN

: 1337

: pentose phosphate pathway,
photosynthesis

: Pentose phosphate pathway,
Pentose and glucuronate interconversions,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Biosynthesis of secondary metabolites,
Microbial metabolism in diverse environments,
Carbon metabolism,
Biosynthesis of amino acids

: pentose phosphate pathway (non-oxidative branch) II,
Bifidobacterium shunt,
heterolactic fermentation,
Calvin-Benson-Bassham cycle,
Rubisco shunt,
pentose phosphate pathway (non-oxidative branch) I,
formaldehyde assimilation III (dihydroxyacetone cycle),
formaldehyde assimilation II (assimilatory RuMP Cycle),
pentose phosphate pathway (partial)

: BR184

: R01529

: RIBULP3EPIM-RXN

: 62

: photosynthesis,
pentose phosphate pathway

: Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism

: Calvin-Benson-Bassham cycle

: BR15940

: R01845

: SEDOHEPTULOSE-BISPHOSPHATASE-RXN

: 1923

: glycolysis,
photosynthesis

: Glycolysis / Gluconeogenesis,
Fructose and mannose metabolism,
Inositol phosphate metabolism,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Biosynthesis of secondary metabolites,
Microbial metabolism in diverse environments,
Carbon metabolism,
Biosynthesis of amino acids

: gluconeogenesis II (Methanobacterium thermoautotrophicum),
glycolysis I (from glucose 6-phosphate),
glycolysis III (from glucose),
glycolysis II (from fructose 6-phosphate),
glycolysis V (Pyrococcus),
gluconeogenesis I,
glycerol degradation to butanol,
sucrose degradation V (sucrose alpha-glucosidase),
gluconeogenesis III,
Calvin-Benson-Bassham cycle,
formaldehyde assimilation III (dihydroxyacetone cycle),
glycolysis IV

: BR219

: R01015

: TRIOSEPISOMERIZATION-RXN

: 4

: glycolysis,
photosynthesis

: Glycolysis / Gluconeogenesis,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Biosynthesis of secondary metabolites,
Microbial metabolism in diverse environments,
Carbon metabolism,
Biosynthesis of amino acids

: glycolysis I (from glucose 6-phosphate),
sucrose biosynthesis I (from photosynthesis),
glycolysis III (from glucose),
glycolysis II (from fructose 6-phosphate),
Entner-Doudoroff pathway I,
gluconeogenesis I,
glycerol degradation to butanol,
Bifidobacterium shunt,
heterolactic fermentation,
superpathway of glucose and xylose degradation,
gluconeogenesis III,
1-butanol autotrophic biosynthesis (engineered),
Calvin-Benson-Bassham cycle,
formaldehyde assimilation III (dihydroxyacetone cycle),
glycolysis IV

: BR47826, BS422744

: R01512

: PHOSGLYPHOS-RXN

: 6, 7644

: photosynthesis

: Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism

: Calvin-Benson-Bassham cycle,
Rubisco shunt

: BR47758

: R01523

: PHOSPHORIBULOKINASE-RXN

: 1692

: pentose phosphate pathway,
photosynthesis

: Pentose phosphate pathway,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Biosynthesis of secondary metabolites,
Microbial metabolism in diverse environments,
Carbon metabolism,
Biosynthesis of amino acids

: pentose phosphate pathway (non-oxidative branch) II,
Bifidobacterium shunt,
Calvin-Benson-Bassham cycle,
Rubisco shunt,
pentose phosphate pathway (non-oxidative branch) I,
formaldehyde assimilation III (dihydroxyacetone cycle),
formaldehyde assimilation II (assimilatory RuMP Cycle),
pentose phosphate pathway (partial)

: BR43957, BS320211

: R01641

: 1TRANSKETO-RXN

: TPP-dependent enzyme (see R06863+R06861)